BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B03SP1|AL430171
(919 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig609 1819 0.0
>3x_Contig609
Length = 1941
Score = 1819 bits (917), Expect = 0.0
Identities = 918/919 (99%)
Strand = Plus / Minus
Query: 1 gatcacgtggatagtttattttccgggtaataaatacagcaggtctctaagcacggcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1589 gatcacgtggatagtttattttccgggtaataaatacagcaggtctctaagcacggcaat 1530
Query: 61 ggaaaaaaaaagcctattacgatttgtaccggtagcgggccggtagggaaactcgtcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1529 ggaaaaaaaaagcctattacgatttgtaccggtagcgggccggtagggaaactcgtcttt 1470
Query: 121 ctgttactttcctttttcctgcccaccacctcatcgtatccctctatagaaaggcagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 ctgttactttcctttttcctgcccaccacctcatcgtatccctctatagaaaggcagaag 1410
Query: 181 ggaagggaaagaaaagcctcagtacaggagccctgaacagaaatcctgaacagggctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1409 ggaagggaaagaaaagcctcagtacaggagccctgaacagaaatcctgaacagggctcct 1350
Query: 241 gtccagggcagagcacaccattagcactggcttggtggaaccagaatttccgtacgcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 gtccagggcagagcacaccattagcactggcttggtggaaccagaatttccgtacgcctt 1290
Query: 301 gccttgcgaagggcttcaagacaggctgttagtggttttcaatgccggatttgatctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 gccttgcgaagggcttcaagacaggctgttagtggttttcaatgccggatttgatctctg 1230
Query: 361 atccagctagtcagctaactcttacttccatagatctaagtgatccctacagattactca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 atccagctagtcagctaactcttacttccatagatctaagtgatccctacagattactca 1170
Query: 421 tacctgatgagatgtgatgcgctcatgtggataggccttgtgtacggaaaaaaaaaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 tacctgatgagatgtgatgcgctcatgtggataggccttgtgtacggaaaaaaaaaaaaa 1110
Query: 481 ttcctcttcgtctttgcagagatgactctaagtaaaaatgataaaggtgaaatttttcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 ttcctcttcgtctttgcagagatgactctaagtaaaaatgataaaggtgaaatttttcac 1050
Query: 541 tttttcatggacgaatttcaccatatatttaaggaaaaagaacttcgccgtatatataaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 tttttcatggacgaatttcaccatatatttaaggaaaaagaacttcgccgtatatataaa 990
Query: 601 gcgacgaataattttttcgattccattcttctgtcttggccttacaccctcttgattcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 gcgacgaataattttttcgattccattcttctgtcttggccttacaccctcttgattcct 930
Query: 661 tttgtgtttagtattgtttgtggaagttttagttggatctttctctgagctcattaaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 tttgtgtttagtattgtttgtggaagttttagttggatctttctctgagctcattaaaga 870
Query: 721 tagattaataacctactacctacctcatttatatacaatgttcagacaagctgctagaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tagattaataacctactacctacctcatttatatacaatgttcagacaagctgctagaca 810
Query: 781 attgattgctaactctcgtgttatcactgctaagagagctatctctttcgctgccagaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 attgattgctaactctcgtgttatcactgctaagagagctatctctttcgctgccagaca 750
Query: 841 atctactgtctctggtttgcgttctactgcctttgcttccaagccattggttgctaccag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 atctactgtctctggtttgcgttctactgcctttgcttccaagccattggttgctaccag 690
Query: 901 gggkatcaagcaaatcaac 919
||| |||||||||||||||
Sbjct: 689 gggtatcaagcaaatcaac 671
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,115
Number of Sequences: 1807
Number of extensions: 14115
Number of successful extensions: 187
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)